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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs611414 chr11:49246281 T/C FOLH1B chr11:89372395-89431886:+ 0.47 7.77 4.7E-14 Box Plot
THCA rs6115092 chr20:25207375 A/G KIAA1486 chr2:226265602-226595471:+ -0.35 -5.94 5.57E-9 Box Plot
THCA rs6116685 chr20:5174981 C/G ZNF335 chr20:44577292-44600811:- -0.5 -6.13 1.88E-9 Box Plot
THCA rs611671 chr11:77584138 C/T INTS4L1 chr7:64601603-64694600:+ 0.42 7.74 6.02E-14 Box Plot
THCA rs61174067 chr10:54477046 C/T HIST2H4A chr1:149804223-149811339:+ -0.51 -5.95 5.14E-9 Box Plot
THCA rs61187820 chr5:46199438 A/G LOC647121 chr1:121260910-121313686:+ 0.37 7.95 1.31E-14 Box Plot
THCA rs611906 chr11:77592196 A/T INTS4L1 chr7:64601603-64694600:+ 0.44 7.92 1.7E-14 Box Plot
THCA rs61226924 chr7:140156833 GTT/G LOC441455 chr9:99488103-99489749:+ 0.51 6.72 5.04E-11 Box Plot
THCA rs61230391 chr2:101153177 A/G LOC285359 chr3:101431278-101432259:+ 0.35 6.65 8.06E-11 Box Plot
THCA rs61270290 chr11:49087313 A/G FOLH1B chr11:89372395-89431886:+ 0.44 6.66 7.76E-11 Box Plot
THCA rs61289879 chr6:28419162 G/A ZFP57 chr6:29640169-29648887:- 0.49 7.44 4.59E-13 Box Plot
THCA rs61296707 chr15:46018944 T/A MIA3 chr1:222791428-222841354:+ 0.44 6.04 3.06E-9 Box Plot
THCA rs61311211 chr5:176552468 A/G LOC388955 chr2:63849182-63850159:- -0.77 -20.39 6.15E-67 Box Plot
THCA rs61312249 chr5:151683560 T/A FILIP1L chr3:99548985-99833357:- 0.22 6.22 1.1E-9 Box Plot
THCA rs613429 chr11:49252000 C/T FOLH1B chr11:89372395-89431886:+ 0.46 6.73 4.9E-11 Box Plot